Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888927.1_cds_XP_016443580.1_38724
CDS Infomation

[gene=LOC107768923] [db_xref=GeneID:107768923] [protein=FRIGIDA-like protein 3] [protein_id=XP_016443580.1] [location=join(29213..30263,31015..31187,31410..31823)] [gbkey=CDS]
Sequence

ATGGAAGATACAGAGTCAGTCGCAACATTGATGGACTCTACAACATCCAAGATACAGCAA
CTACAGAAAGCATTCGCTGAGTTGGAAAGTCACCGTGCTGTTACTCTCAACCTGCAGTGG
AAGCAACTTGAAGAGCACTTTCATGGGCTTCAGAAGTCCTTGAAGAGGCGTTTCAATGAA
CTGGAAGACCAAGAGAAGGAGTTTGAGACAAAAATTTTCCAATCTAGGGAGATGTTGGAG
AAGCATCAAGCAGCTGTTATTGCTAAAGAGCAAGCTTCACTTGAGAGGCTCCAGGAGAAA
AGAGATACAGCAGTTTCCGCCATTGCTATTGCTCTTGAGAAGCATAGGAAGCCTTGCTCC
GTAGAACCTGCTGTCATTAGTTGTGAGGTTCAAGATGGGCCATCTATTCTAGAAGAAAAG
CCTGATGATTTCATAGAGATTGGGCATGTTATAGAGGATACTGGAAAACCTTCTCAGGGT
GGTGGTGTGGAAGTTAAGTCTTATCCAGAGCTAGTGAAGCTGTGCCAAAATATGGATTCT
GAAGGCCTTCACAAATTCATATCAGACAACCGTAAAAACCTGGCAGCTCTTAGGGAGGAG
ATTCCACTTGCTTTAAGAGCTGCAATCAATCCTGCCTCTCTGGTTCTGGACTCACTAAAG
GGGTTTTACAACTCAGATGTGTCAATTTCTGAGGCTAAAAAAGATGCTAATCTTTTGGGT
TTGCGGCGAACTTGTATTATGCTACTGGAATGCCTTAGTACTTCATTAAACACCTTGGAA
AAGAATTCTATTTCAAGTATAATATCAGAAAATGTAAAAGAACGTGCAAAAGGTATCGCT
GAGGAGTGGAACCCGAAGTTAGATGAACTTGACATTGATGCAAGTAATGGAAATTCTTTG
GAGGCTCATGCATTCTTACAGCTACTTGCTACTTTTAGTATTAATTCCAATTTTAACCAG
GAGAACTTATCCAAGCTGATACCGATGGTTTCACGTCGTCGTCAAACAGCTGATCTCTGT
CGTTCCCTTGGATTATCTGACAGAATGCCAGGTGTTATTGATGTGTTGATATATAATGGA
AGACATATAGATGCTGTTAATCTAGCTTTTGCATTTGAGCTGACACAGCAGTTTCCGCCT
GTTTCTCTATTGAAATCCTACTTGAATGAAGCTAGCAAAGCATCTATACCTCTCAATTCT
GGAAATGCATCACCTACTGTGCAGAATGATGTCAACGAGAAAGAGTTGACTGCACTAAAG
GCCGTGTTAAAATGTGTCGAAGACCATAAGCTTGAGGAGCAATACCCTGTGGACCCCCTT
CAGAAAAGGGTTCTTCAGCTGGAGAAAGCAAAGGCAGACAAGAAAAAGGCAACTGAAGTT
GCGAAACCTCAATCTAAAAGGCCTCGTCCCAATGGTGTCGGAAATGGCCCCCGAGTAAAT
AATGTTGTCACGGACAAGAACTTCTATCCCAGAATGACTGAGAGGTGCCCGCAATCCGTT
TATGACAGACCATATGCTCACCCTGGACCGACCAGCACCCATGTTCCTTTATTCATGGGT
GCTGCTGTTTACAACTTTTCTCCTGGCTATGACTTCTTTGGAAATGGCTACCATTACCAG
GCTCCTTACCTGCACTGA

Peptide Sequence

PEP ID

XP_016443580.1
PEP Infomation

PREDICTED: FRIGIDA-like protein 3 [Nicotiana tabacum]
Sequence

MEDTESVATLMDSTTSKIQQLQKAFAELESHRAVTLNLQWKQLEEHFHGLQKSLKRRFNE
LEDQEKEFETKIFQSREMLEKHQAAVIAKEQASLERLQEKRDTAVSAIAIALEKHRKPCS
VEPAVISCEVQDGPSILEEKPDDFIEIGHVIEDTGKPSQGGGVEVKSYPELVKLCQNMDS
EGLHKFISDNRKNLAALREEIPLALRAAINPASLVLDSLKGFYNSDVSISEAKKDANLLG
LRRTCIMLLECLSTSLNTLEKNSISSIISENVKERAKGIAEEWNPKLDELDIDASNGNSL
EAHAFLQLLATFSINSNFNQENLSKLIPMVSRRRQTADLCRSLGLSDRMPGVIDVLIYNG
RHIDAVNLAFAFELTQQFPPVSLLKSYLNEASKASIPLNSGNASPTVQNDVNEKELTALK
AVLKCVEDHKLEEQYPVDPLQKRVLQLEKAKADKKKATEVAKPQSKRPRPNGVGNGPRVN
NVVTDKNFYPRMTERCPQSVYDRPYAHPGPTSTHVPLFMGAAVYNFSPGYDFFGNGYHYQ
APYLH

Transcript Sequence

Gene sequence data has not been registered.